BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G04SP1|AL426731
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1284 0.0
>3x_Contig1349
Length = 5890
Score = 1284 bits (639), Expect = 0.0
Identities = 747/778 (96%), Gaps = 13/778 (1%)
Strand = Plus / Minus
Query: 1 atcagttagaagatttacgtattgaatatyatagagtagatttggttgttatccgtycta 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 5552 atcagttagaagatttacgtattgaatattatagagtagatttggttgttatccgttcta 5493
Query: 61 caactttgcagtgtgtagatgagatgtctttgataccgagacgttgaccgaaaaattggt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5492 caactttgcagtgtgtagatgagatgtctttgatac-gagacgttgaccgaaaaattggt 5434
Query: 121 cgtmaacgttgtagcttttcttggtatgctttctccgatattgtttcttgcaatgtgtcc 180
||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5433 cgtaaacgttgtag-ttttcttggtatg-tttctccgatattgtttcttgcaatgtgtcc 5376
Query: 181 gttcttcttgttcaataaatatgctmtcgttacctctctgttgcmattcgatcaagcgct 240
||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| ||
Sbjct: 5375 gttcttcttgttcaataaatatg-tatcgttacctctctgttgcaattcgatcaagc-ct 5318
Query: 241 gcttccycgaatgcggcaagtwagtcatattgtaaatctttgacgtcttctatcccacaa 300
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5317 gcttcctcgaatgcggcaagtaagtcatattgtaaatctttgacgtcttctatcccacaa 5258
Query: 301 cagagtctgatcaagycttcaggcgaacgcyctttgtttccgtcagttctggrtcgatgc 360
||||||||||||||| ||||||| |||||| |||||||||||| |||||||| ||||||
Sbjct: 5257 cagagtctgatcaagtcttcagg-gaacgctctttgtttccgt-agttctggatcgatg- 5201
Query: 361 gaggcrtgtgacatcttgcatggcatggagatcaacgagttgacacatccaamcgatacc 420
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5200 gaggcatgtgacatcttgcatggcatggagatcaacgagttgacacatccaaacgatacc 5141
Query: 421 gtgacggcccatatatttagtcttttagaagttacaatggcttcgcttagtgctaggtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5140 gtgacggcccatatatttagtcttttagaagttacaatggcttcgcttagtgctaggtcg 5081
Query: 481 ccagtctcaatggatagcmctgcaccgggaccattgttgaaacttttatgcaattcgaac 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5080 ccagtctcaatggatagcactgcaccgggaccattgttgaaacttttatgcaattcgaac 5021
Query: 541 tgagggtgagattccaacccaacaaaccttgtctttacgttgctggttattatctgtmgc 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 5020 tgagggtgagattccaacccaacaaaccttgtcttta-gttgctggttattatctgtag- 4963
Query: 601 gcttgamtccgcatatatcttgtagccagtgcgaga--cccatctgcgtttatctgttgt 658
|||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 4962 gcttgaatccgcatatatcttgtagccagtgcgagagcaccat-tgcgtttatctgttgt 4904
Query: 659 ttgtgaagacgaacagataaggtcttgagaccacggmtcaagagccatgaatccatcgga 718
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4903 ttgtaaagacgaacagataaggtcttgagaccacggatcaagagccatgaatccatcgga 4844
Query: 719 gatagaccggcaccggtactgttaatgacgaaatatacggatggagccacgtccttct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4843 gatagaccggcaccggtactgttaatgacgaaatatacggatggagccacgtccttct 4786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3866
Number of Sequences: 1807
Number of extensions: 3866
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)